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cellbase-core

org.opencb.cellbase : cellbase-core

Dec 06, 2021
4 usages
69 stars
  1. Download JAR / Source Code / Javadoc
  2. View Java Class Source Code in JAR file
  3. View Javadoc in JAR file

Download JAR / Source / Javadoc

Version Date Download
5.0.0 Dec 06, 2021
5.0.0-rc Jun 16, 2021
4.9.1 Feb 25, 2021
4.9.0 Feb 17, 2021
4.8.1 Aug 28, 2020
4.8.0 Feb 19, 2020
4.7.3 Oct 23, 2020
4.7.2 Oct 06, 2020
4.7.1 Sep 19, 2019
4.7.0 Jun 13, 2019
4.6.3 Nov 03, 2019
4.6.2 Mar 18, 2019
4.6.1 Sep 28, 2018
4.6.0 Aug 23, 2018
4.5.6 Aug 02, 2018
4.5.5 Mar 23, 2018
4.5.4 Feb 08, 2018
4.5.3 Nov 20, 2017
4.5.2 Nov 20, 2017
4.5.0 Sep 15, 2017
4.5.0-rc.3 Jul 28, 2017
4.5.0-rc.2.1 Jul 28, 2017
4.5.0-rc.2 May 23, 2017
4.5.0-rc.1 Mar 17, 2017
4.5.0-rc Jan 11, 2017
4.5.0-beta.1 Nov 07, 2016
4.5.0-beta Sep 27, 2016
4.0.0 Sep 27, 2016
4.0.0-rc Apr 06, 2016
3.1.3 Jul 31, 2015
3.1.1 Apr 21, 2015

View Java Class Source Code in JAR file

  1. Download JD-GUI to open JAR file and explore Java source code file (.class .java)
  2. Click menu "File → Open File..." or just drag-and-drop the JAR file in the JD-GUI window cellbase-core-5.0.0-sources.jar file or cellbase-core-5.0.0.jar file.
    Once you open a JAR file, all the java classes in the JAR file will be displayed.
org/
org/opencb/
org/opencb/cellbase/
org/opencb/cellbase/core/
org/opencb/cellbase/core/variant/
org/opencb/cellbase/core/config/
org/opencb/cellbase/core/common/
org/opencb/cellbase/core/common/regulatory/
org/opencb/cellbase/core/common/drug/
org/opencb/cellbase/core/common/clinical/
org/opencb/cellbase/core/common/clinical/gwas/
org/opencb/cellbase/core/serializer/
org/opencb/cellbase/core/result/
org/opencb/cellbase/core/api/
org/opencb/cellbase/core/api/query/
org/opencb/cellbase/core/exception/
org/opencb/cellbase/core/utils/
configuration.yml
log4j2.file.xml
log4j2.xml
git.properties
org/opencb/cellbase/core/ParamConstants$QueryParams.java
org/opencb/cellbase/core/ParamConstants$FeatureType.java
org/opencb/cellbase/core/variant/AnnotationBasedPhasedQueryManager.java
org/opencb/cellbase/core/variant/PopulationFrequencyPhasedQueryManager.java
org/opencb/cellbase/core/variant/PhasedQueryManager.java
org/opencb/cellbase/core/variant/ClinicalPhasedQueryManager.java
org/opencb/cellbase/core/variant/CustomAnnotationPhasedQueryManager.java
org/opencb/cellbase/core/config/SpeciesConfiguration$Zone.java
org/opencb/cellbase/core/config/SpeciesProperties.java
org/opencb/cellbase/core/config/SpeciesConfiguration.java
org/opencb/cellbase/core/config/DownloadProperties$EnsemblProperties.java
org/opencb/cellbase/core/config/Rest.java
org/opencb/cellbase/core/config/DownloadProperties$URLProperties.java
org/opencb/cellbase/core/config/CellBaseConfiguration$ConfigurationFileFormat.java
org/opencb/cellbase/core/config/SpeciesConfiguration$Assembly.java
org/opencb/cellbase/core/config/DatabaseCredentials.java
org/opencb/cellbase/core/config/SpeciesConfiguration$ShardRange.java
org/opencb/cellbase/core/config/SpeciesConfiguration$ShardConfig.java
org/opencb/cellbase/core/config/CellBaseConfiguration.java
org/opencb/cellbase/core/config/DownloadProperties.java
org/opencb/cellbase/core/config/ServerProperties.java
org/opencb/cellbase/core/config/MongoDBDatabaseCredentials$ReplicaSet.java
org/opencb/cellbase/core/config/Databases.java
org/opencb/cellbase/core/config/MongoDBDatabaseCredentials.java
org/opencb/cellbase/core/config/CellBaseConfiguration$1.java
org/opencb/cellbase/core/common/GitRepositoryState.java
org/opencb/cellbase/core/common/regulatory/Tfbs.java
org/opencb/cellbase/core/common/regulatory/Pwm.java
org/opencb/cellbase/core/common/regulatory/RegulatoryRegion.java
org/opencb/cellbase/core/common/drug/DrugPartnerInteraction.java
org/opencb/cellbase/core/common/drug/Partner.java
org/opencb/cellbase/core/common/drug/Interactor.java
org/opencb/cellbase/core/common/drug/XRef.java
org/opencb/cellbase/core/common/drug/Drug.java
org/opencb/cellbase/core/common/Species.java
org/opencb/cellbase/core/common/IntervalFeatureFrequency.java
org/opencb/cellbase/core/common/clinical/gwas/GwasTrait.java
org/opencb/cellbase/core/common/clinical/gwas/GwasStudy.java
org/opencb/cellbase/core/common/clinical/gwas/Gwas.java
org/opencb/cellbase/core/common/clinical/gwas/GwasTest.java
org/opencb/cellbase/core/common/clinical/Cosmic.java
org/opencb/cellbase/core/common/clinical/ClinvarPublicSet.java
org/opencb/cellbase/core/common/clinical/ClinicalVariant.java
org/opencb/cellbase/core/common/clinical/ClinicalVariation.java
org/opencb/cellbase/core/serializer/CellBaseJsonFileSerializer.java
org/opencb/cellbase/core/serializer/CellBaseSerializer.java
org/opencb/cellbase/core/serializer/CellBaseFileSerializer.java
org/opencb/cellbase/core/result/CellBaseDataResult.java
org/opencb/cellbase/core/result/CellBaseDataResponse.java
org/opencb/cellbase/core/api/TfbsQuery.java
org/opencb/cellbase/core/api/RepeatsQuery.java
org/opencb/cellbase/core/api/TfbsQuery$Builder.java
org/opencb/cellbase/core/api/RegulationQuery.java
org/opencb/cellbase/core/api/query/ProjectionQueryOptions.java
org/opencb/cellbase/core/api/query/LogicalList.java
org/opencb/cellbase/core/api/query/CellBaseQueryOptions$Order.java
org/opencb/cellbase/core/api/query/CellBaseQueryOptions.java
org/opencb/cellbase/core/api/query/QueryParameter.java
org/opencb/cellbase/core/api/query/QueryException.java
org/opencb/cellbase/core/api/query/AbstractQuery.java
org/opencb/cellbase/core/api/ClinicalVariantQuery.java
org/opencb/cellbase/core/api/OntologyQuery$OntologyQueryBuilder.java
org/opencb/cellbase/core/api/RegulationQuery$1.java
org/opencb/cellbase/core/api/ClinicalVariantQuery$ClinicalVariantQueryBuilder.java
org/opencb/cellbase/core/api/OntologyQuery.java
org/opencb/cellbase/core/api/XrefQuery$1.java
org/opencb/cellbase/core/api/ProteinQuery$ProteinQueryBuilder.java
org/opencb/cellbase/core/api/GenomeQuery.java
org/opencb/cellbase/core/api/RegulationQuery$Builder.java
org/opencb/cellbase/core/api/RepeatsQuery$1.java
org/opencb/cellbase/core/api/FileQuery$FileQueryBuilder.java
org/opencb/cellbase/core/api/FileQuery.java
org/opencb/cellbase/core/api/GeneQuery$GeneQueryBuilder.java
org/opencb/cellbase/core/api/GenomeQuery$GenomeQueryBuilder.java
org/opencb/cellbase/core/api/ProteinQuery.java
org/opencb/cellbase/core/api/XrefQuery$Builder.java
org/opencb/cellbase/core/api/VariantQuery$Builder.java
org/opencb/cellbase/core/api/VariantQuery$1.java
org/opencb/cellbase/core/api/RepeatsQuery$Builder.java
org/opencb/cellbase/core/api/XrefQuery.java
org/opencb/cellbase/core/api/GeneQuery.java
org/opencb/cellbase/core/api/TfbsQuery$1.java
org/opencb/cellbase/core/api/VariantQuery.java
org/opencb/cellbase/core/api/TranscriptQuery$TranscriptQueryBuilder.java
org/opencb/cellbase/core/api/TranscriptQuery.java
org/opencb/cellbase/core/exception/CellBaseException.java
org/opencb/cellbase/core/utils/BioUtils.java
org/opencb/cellbase/core/utils/BioUtils$Biotype.java
org/opencb/cellbase/core/utils/SpeciesUtils.java
org/opencb/cellbase/core/ParamConstants.java
log4j2.console.xml
META-INF/maven/
META-INF/maven/org.opencb.cellbase/
META-INF/maven/org.opencb.cellbase/cellbase-core/
META-INF/maven/org.opencb.cellbase/cellbase-core/pom.xml
META-INF/maven/org.opencb.cellbase/cellbase-core/pom.properties

View Javadoc in JAR file

  1. Download WinRAR to extract JAR file.
  2. Navigate to cellbase-core-5.0.0-javadoc.jar you want to extract in File Explorer.
  3. Right-click cellbase-core-5.0.0-sources.jar file → Select "Extract Here" in the drop-down context menu.
  4. Navigate to cellbase-core-5.0.0-javadoc extracted folder in File Explorer.
  5. Open index.html file with your Browser to view the contents of the javadoc HTML files.

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